MTU

Batch Submission Scripts
Users must not login to a compute node to submit a job. Instead, it needs to be submitted via a batch-submission process and available compute node(s) is/are selected by the SGE Job Queue System.

Run getscript in a terminal to generate the batch submission script corresponding to a given calculation. Please make sure to read and follow all the on-screen instructions before submitting the job. There is no need to change any variables.
warning Modifying variable(s) and/or submitting a job outside of SGE will most likely result in termination of your calculation and/or erroneous, often inexpeclicable, results.

Status of a job that has already been submitted can be tracked via qstat command or the graphical interface. Other useful commands are qhold, qdel and users are advised to read the corresponding man pages to learn more about the available options/features.
Notification
You will receive an email, from root, upon completion and/or if the job is aborted or suspended, with some information as follows: 



Date
: Mon, 12 Sep 2005 12:57:15 -0400 (EDT)





From: root





To: YOUR-EMAIL-ADDRESS





Subject: Job ID (SCRIPT-NAME) Complete




 Job ID (SCRIPT-NAME) Complete




User= YOUR-USER-ID





Queue= all.q@compute-0-10.local





Host= compute-0-10.local





Start Time= 09/12/2005 12:57:11





End Time= 09/12/2005 12:57:15





User Time= 00:00:03





System Time= 00:00:00





Wallclock Time= 00:00:04





CPU= 00:00:03





Max vmem= 85.805M





Exit Status= 0
note Just becauase the email says JOB COMPLETE does not necessarily mean that the calculation was successfully completed. For every calculation you submit, a file, jobinfo.compute-0-N.PID will be generated in the working directory along with SCRIPT-NAME.oJOBID with important information. Latter file usually contains much of the output and errors, if any.